PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M01011.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 213aa    MW: 23657.1 Da    PI: 4.6221
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M01011.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.82.5e-24152959
                      EEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY  9 KYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                      KYGqK++kgs++pr+YYrC+s+ gCp++k++ers+ d +++++tY +eHnh+
  Migut.M01011.1.p  1 KYGQKPIKGSPYPRGYYRCSSSkGCPARKQLERSRVDSNMLVVTYYSEHNHP 52
                      9*******************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007743.6E-26153IPR003657WRKY domain
PROSITE profilePS5081128.105154IPR003657WRKY domain
SuperFamilySSF1182902.22E-20154IPR003657WRKY domain
PfamPF031061.4E-20152IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.0E-24154IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
KYGQKPIKGS PYPRGYYRCS SSKGCPARKQ LERSRVDSNM LVVTYYSEHN HPLPASRNSH  60
HRTTAAAAAA AAATTTSSVS EDEEEEMEEE EKKPTNLLSN INNQSSQEQV VVNPDHYRFT  120
NLGEGPLLIN GGEFGWFSDF ESTSCTMLES PILTEDDGIN MDNEMAMIFT MREEDESLFA  180
DLGELPECST VFRRGMAQRE AVQRRPSLAS TS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-161542274WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848473.11e-159PREDICTED: probable WRKY transcription factor 65
TrEMBLA0A022QNR11e-126A0A022QNR1_ERYGU; Uncharacterized protein
STRINGSolyc02g072190.2.13e-66(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA64752333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.25e-41WRKY DNA-binding protein 69